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Manager did not comply with stricter California regulations, according to the International Transport Intermediaries Club.
The $461m purchase of Maher's Canadian terminal will allow the Dubai-owned port operator to increase its U.S. business.
Shipper group also calls on carriers to quit discussion agreements, conferences.
The vessel, which runs on liquid natural gas, will enter service later this year between Jacksonville and San Juan.
Trans-Pacific Partnership and EU free trade agreements would prevent partners from undercutting U.S. jobs, according to the president.
The Federal Maritime Commission may institute more stringent monitoring of ocean carrier alliances, according to commissioner William P. Doyle.